Index A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | R | S | T | V | W | X | Y A alexander() (in module topoly) ALL (topoly.params.Bridges attribute) aps() (in module topoly) ATOMS (topoly.params.OutputType attribute) B blmho() (in module topoly) Bridges (class in topoly.params) C Ccode (topoly.params.OutputFormat attribute) close_curve() (in module topoly) CLOSED (topoly.params.Closure attribute) Closure (class in topoly.params) Colors (class in topoly.params) conway() (in module topoly) COVALENT (topoly.params.Bridges attribute) D DensitySurface (class in topoly.params) Dictionary (topoly.params.OutputFormat attribute) DIRECTION (topoly.params.Closure attribute) DONTPLOT (topoly.params.SurfacePlotFormat attribute) draw_tangle() (in module topoly) E EASY (topoly.params.ReduceMethod attribute) EMcode (topoly.params.OutputType attribute) exportpoly() (in module topoly) F find_handcuffs() (in module topoly) find_loops() (in module topoly) find_matching() (in module topoly) find_spots() (in module topoly) find_thetas() (in module topoly) G generate_handcuff() (in module topoly) generate_lasso() (in module topoly) generate_link() (in module topoly) generate_loop() (in module topoly) generate_theta() (in module topoly) generate_walk() (in module topoly) getpoly() (in module topoly) GLN (topoly.params.Colors attribute) gln() (in module topoly) H HIGH (topoly.params.DensitySurface attribute) (topoly.params.PrecisionSurface attribute) homfly() (in module topoly) I IDENT (topoly.params.OutputType attribute) import_structure() (in module topoly) ION (topoly.params.Bridges attribute) J jones() (in module topoly) JSMOL (topoly.params.SurfacePlotFormat attribute) K kauffman_bracket() (in module topoly) kauffman_polynomial() (in module topoly) KMT (topoly.params.ReduceMethod attribute) KnotProt (topoly.params.OutputFormat attribute) Knots (topoly.params.Colors attribute) L lasso_type() (in module topoly) LOW (topoly.params.DensitySurface attribute) (topoly.params.PrecisionSurface attribute) M make_surface() (in module topoly) MASS_CENTER (topoly.params.Closure attribute) Mathematica (topoly.params.OutputType attribute) MATHEMATICA (topoly.params.SurfacePlotFormat attribute) Matrix (topoly.params.OutputFormat attribute) MEDIUM (topoly.params.DensitySurface attribute) (topoly.params.PrecisionSurface attribute) MMCIF (topoly.params.OutputType attribute) N NO (topoly.params.ReduceMethod attribute) NXYZ (topoly.params.OutputType attribute) O ONE_POINT (topoly.params.Closure attribute) OutputFormat (class in topoly.params) OutputType (class in topoly.params) P PDB (topoly.params.OutputType attribute) PDcode (topoly.params.OutputType attribute) PDF (topoly.params.PlotFormat attribute) plot_graph() (in module topoly) plot_matrix() (in module topoly) PlotFormat (class in topoly.params) PNG (topoly.params.PlotFormat attribute) PrecisionSurface (class in topoly.params) PSF (topoly.params.OutputType attribute) R RAYS (topoly.params.Closure attribute) reduce_structure() (in module topoly) ReduceMethod (class in topoly.params) REIDEMEISTER (topoly.params.ReduceMethod attribute) S SSBOND (topoly.params.Bridges attribute) Structure (topoly.params.Colors attribute) SurfacePlotFormat (class in topoly.params) SVG (topoly.params.PlotFormat attribute) T translate_code() (in module topoly) translate_matrix() (in module topoly) TWO_POINTS (topoly.params.Closure attribute) V VMD (topoly.params.SurfacePlotFormat attribute) W writhe() (in module topoly) X XYZ (topoly.params.OutputType attribute) xyz2vmd() (in module topoly) Y yamada() (in module topoly)
